CDS

Accession Number TCMCG057C15705
gbkey CDS
Protein Id XP_018478889.1
Location complement(join(4565677..4565748,4565841..4565951,4566031..4566117,4566418..4566491,4566588..4566681,4566774..4566819,4567165..4567283))
Gene LOC108849783
GeneID 108849783
Organism Raphanus sativus

Protein

Length 200aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018623387.1
Definition PREDICTED: pre-mRNA cleavage factor Im 25 kDa subunit 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation specificity factor subunit 5-like
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14397        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017091        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031437        [VIEW IN EMBL-EBI]
GO:0031439        [VIEW IN EMBL-EBI]
GO:0031440        [VIEW IN EMBL-EBI]
GO:0031442        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042382        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050685        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051262        [VIEW IN EMBL-EBI]
GO:0051290        [VIEW IN EMBL-EBI]
GO:0051291        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0110104        [VIEW IN EMBL-EBI]
GO:1900363        [VIEW IN EMBL-EBI]
GO:1900365        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901532        [VIEW IN EMBL-EBI]
GO:1901534        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903313        [VIEW IN EMBL-EBI]
GO:1903706        [VIEW IN EMBL-EBI]
GO:1903708        [VIEW IN EMBL-EBI]
GO:1905456        [VIEW IN EMBL-EBI]
GO:1905458        [VIEW IN EMBL-EBI]
GO:1990120        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000736        [VIEW IN EMBL-EBI]
GO:2000738        [VIEW IN EMBL-EBI]
GO:2000973        [VIEW IN EMBL-EBI]
GO:2000975        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGATGTCTCAGGTGGTGAACACGTACCCTCTCTCGAACTACAGCTTCGGAACTAAAGAACCGAAGCTGGAGAAGGACACCTCCGTCGCCGACAGACTCGCTCGTATGAAAGTCAACTATATGAAAGAGGGCATGAGGACTAGCGTTGAAGGGATTCTTCTGGTACAAGAACACAACCATCCTCATATACTTCTCCTGCAAATTGGTAACACGTTCTGCAAACTTCCAGGTGGACGCCTAAAGCCTGGAGAAAACGAAGTCGAAGGACTGAAGAGAAAGTTGACCAGTAAGCTTGGAGGCAATTCGGCTGGTTTTGTACCTGACTGGAAGGTAGGAGAATGTGTTGCGACATGGTGGCGTCCAAACTTTGAAACCATGATGTACCCGTATTGCCCTCCTCACATCACCAAACCAAAGGAATGCAAGAGACTCTACATTGTTCACTTGTCTGAGAAAGAGTACTTTGCAGTGCCCAAAAACTTGAAACTCTTGGCCGTCCCTTTGTTTGAACTCTATGACAATGTTCAGAGATATGGACCAGTTATATCGACCATTCCTCAACAGCTATCCAGATTCCATTTCAACATGATTAGTTCGTGA
Protein:  
MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAGFVPDWKVGECVATWWRPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVISTIPQQLSRFHFNMISS